Sample types
What is a Sample type?
Used for capturing the necessary metadata for submission of raw nucleotide sequencing data to ENA. Necessary for the use of the ENA export feature.
alias (String) *, status (Controlled Vocabulary - ENA export status attribute) *, accession (String) , title (String) *, study_type (Controlled Vocabulary - ENA study_type) *, study_abstract (String) *, pubmed_id (Integer) , submission_date (String)
Not specified
Used for capturing the necessary metadata for submission of raw nucleotide sequencing data to ENA. Necessary for the use of the ENA export feature.
alias (String) *, status (Controlled Vocabulary - ENA export status attribute) *, accession (String) , title (String) *, study_alias (String) *, sample_alias (String) *, design_description (String) *, library_name (String) *, library_strategy (Controlled Vocabulary - ENA library_strategy) *, library_source (Controlled Vocabulary - ENA library_source) *, library_selection (Controlled Vocabulary - ENA library_selection) *, library_layout (Controlled Vocabulary - ENA library_layout) *, insert_size (String) , library_construction_protocol (String) *, platform (Controlled Vocabulary - ENA platform) *, instrument_model (Controlled Vocabulary - ENA instrument_model) *, submission_date (String)
Not specified
Used for capturing the necessary metadata for submission of raw nucleotide sequencing data to ENA. Necessary for the use of the ENA export feature.
alias (String) *, status (Controlled Vocabulary - ENA export status attribute) *, accession (String) , experiment_alias (String) *, file_name (String) *, file_format (Controlled Vocabulary - ENA file_format) *, file_checksum (String) , submission_date (String)
Not specified
Used for capturing the necessary metadata for submission of raw nucleotide sequencing data to ENA. Necessary for the use of the ENA export feature. Based on ENA's Sample checklist ERC000011.
alias (String) *, status (Controlled Vocabulary - ENA export status attribute) *, accession (String) , title (String) *, scientific_name (String) , taxon_id (Integer) *, sample_description (String) *, cell_type (String) , dev_stage (String) , germline (String) , tissue_lib (String) , tissue_type (String) , collection_date (String) , isolation_source (String) , lat_lon (String) , collected_by (String) , geographic location (country and/or sea) (String) , geographic location (region and locality) (String) , identified_by (String) , environmental_sample (Controlled Vocabulary - ENA environmental_sample) , mating_type (String) , sex (String) , lab_host (String) , host scientific name (String) , bio_material (String) , culture_collection (String) , specimen_voucher (String) , cultivar (String) , ecotype (String) , isolate (String) , sub_species (String) , variety (String) , sub_strain (String) , cell_line (String) , serotype (String) , serovar (String) , strain (String) , submission_date (String)
Not specified
