Demo ST ENA Studies 2
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Attributes
| Name | Type | Description | PID  | Unit |
|---|---|---|---|---|
| Input (Source Name)* | Registered Sample List | Existing Samples in DataHub that represent input for this protocol. | - | - |
| sample collection* | String | type of assay or experimental step performed. | - | - |
| Sample Name* | String | Name of the major output resulting from the application of the protocol. | - | - |
| title* | String | Short text that can be used to call out sample records in search results or in displays. | - | - |
| sample_description* | String | Free-form text describing the sample, its origin, and its method of isolation. | - | - |
| collection date* | ENA custom date | Date of the sample collection | - | - |
| accession | String | ENA experiment accession code. Provided by ENA after submission. | - | - |
| submission_date | String | Date in which experiment was submitted to ENA. | - | - |
| status | Controlled Vocabulary - status | Status of submission to ENA. | - | - |
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Not specified Creators and SubmitterViews: 57 Downloads: 16
Created: 8th May 2024 at 09:57
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Related items
Projects: ENA upload tool project
Institutions: VIB
This project describes the workflow to export the metadata to an ISA-JSON and submit to ENA, using the ENA Upload Tools.More information about the ENA Upload CLI can be found here: https://github.com/usegalaxy-eu/ena-upload-cli.
Public web page: Not specified
This investigation holds the metadata to demonstrate the workflow with the ENA Upload Tool.
Submitter: Kevin De Pelseneer
Studies: Demo Study for ENA
Assays: DNA Sequencing assay, ENA DNA Sequencing Test case ENA, Library construction
This demo study is an example, demonstrating how the study metadata should be structured for a successful submission towards ENA.
Submitter: Kevin De Pelseneer
Investigation: Demonstration ENA Upload Tool
Assays: DNA Sequencing assay, ENA DNA Sequencing Test case ENA, Library construction
Input (Registered Sample List) *, sample collection (String) *, Sample Name (String) *, title (String) *, sample_description (String) *, collection date (ENA custom date) *, accession (String) , submission_date (String) , status (Controlled Vocabulary - status)
