Demo Study for ENA
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This demo study is an example, demonstrating how the study metadata should be structured for a successful submission towards ENA.
SEEK ID: https://datahub-usecase.elixir-belgium.org/studies/2
Projects: ENA upload tool project
Study position:
Is ISA-JSON compliant: true
- source ENA Upload Tool 1.0.0 (id: 13)
- sample collection ENA Upload Tool 1.0.0 (id: 14)
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Creators and SubmitterViews: 483
Created: 8th May 2024 at 09:57
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Projects: ENA upload tool project
Institutions: VIB
This project describes the workflow to export the metadata to an ISA-JSON and submit to ENA, using the ENA Upload Tools.More information about the ENA Upload CLI can be found here: https://github.com/usegalaxy-eu/ena-upload-cli.
Public web page: Not specified
This investigation holds the metadata to demonstrate the workflow with the ENA Upload Tool.
Submitter: Kevin De Pelseneer
Studies: Demo Study for ENA
Assays: DNA Sequencing assay, ENA DNA Sequencing Test case ENA, Library construction
This is the stream of experimental assay, collecting the metadata of the experimental assays
Submitter: Kevin De Pelseneer
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Demonstration ENA Upload Tool
Study: Demo Study for ENA
Submitter: Kevin De Pelseneer
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Demonstration ENA Upload Tool
Study: Demo Study for ENA
Submitter: Kevin De Pelseneer
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Demonstration ENA Upload Tool
Study: Demo Study for ENA
Input (Source Name) (Registered Sample List) *, sample collection (String) *, Sample Name (String) *, title (String) *, sample_description (String) *, collection date (ENA custom date) *, accession (String) , submission_date (String) , status (Controlled Vocabulary - status)
Not specified
Source Name (String) *, geographic location (country and/or sea) (Controlled Vocabulary - geographic location (country and/or sea)) *, taxon_id (Integer) *
Not specified
Warning: A Protocol is missing. Associate a Protocol before exporting ISA.
